HL_7ZJW_104

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CAU(OMC)CAAGG(A2M)AG

Length

12 nucleotides

Bulged bases

7ZJW|1|S2|A|465

QA status

Modified nucleotides: OMC, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|S2|C|460
7ZJW|1|S2|A|461
7ZJW|1|S2|U|462
7ZJW|1|S2|OMC|463
7ZJW|1|S2|C|464
7ZJW|1|S2|A|465
7ZJW|1|S2|A|466
7ZJW|1|S2|G|467
7ZJW|1|S2|G|468
7ZJW|1|S2|A2M|469
7ZJW|1|S2|A|470
7ZJW|1|S2|G|471

Current chains

Chain S2

18S rRNA

Nearby chains

Chain E

eEFSec

Chain LY

60S ribosomal protein L23

Chain SR

40S ribosomal protein S6