HL_7ZJW_142

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CCCGAGCCG

Length

9 nucleotides

Bulged bases

7ZJW|1|S2|G|837, 7ZJW|1|S2|A|838, 7ZJW|1|S2|C|840, 7ZJW|1|S2|C|841

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|S2|C|834
7ZJW|1|S2|C|835
7ZJW|1|S2|C|836
7ZJW|1|S2|G|837
7ZJW|1|S2|A|838
7ZJW|1|S2|G|839
7ZJW|1|S2|C|840
7ZJW|1|S2|C|841
7ZJW|1|S2|G|842

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SP

40S ribosomal protein eS4

Chain Sj

40S ribosomal protein S24