HL_7ZP8_020

3D structure

PDB id

7ZP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CGAAUAG

Length

7 nucleotides

Bulged bases

7ZP8|1|b|U|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZP8_020 not in the Motif Atlas

Geometric match to HL_5J7L_151

Geometric discrepancy: 0.2431

The information below is about HL_5J7L_151

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80922.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

3

Unit IDs

7ZP8|1|b|C|611
7ZP8|1|b|G|612
7ZP8|1|b|A|613
7ZP8|1|b|A|614
7ZP8|1|b|U|615
7ZP8|1|b|A|616
7ZP8|1|b|G|617

Current chains

Chain b

23S rRNA

Nearby chains

Chain e

50S ribosomal protein L4