HL_7ZP8_073
3D structure
- PDB id
- 7ZP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GUUCGAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZP8_073 not in the Motif Atlas
- Geometric match to HL_4GCW_002
- Geometric discrepancy: 0.156
- The information below is about HL_4GCW_002
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 96
Unit IDs
7ZP8|1|v|G|53
7ZP8|1|v|U|54
7ZP8|1|v|U|55
7ZP8|1|v|C|56
7ZP8|1|v|G|57
7ZP8|1|v|A|58
7ZP8|1|v|A|59
7ZP8|1|v|U|60
7ZP8|1|v|C|61
Current chains
- Chain v
- Pro-tRNA
Nearby chains
- Chain b
- Large subunit ribosomal RNA; LSU rRNA
- Chain f
- 50S ribosomal protein L5
- Chain m
- 50S ribosomal protein L16
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