HL_7ZP8_077

3D structure

PDB id

7ZP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CCUUGAUGUGUAGGAUAGGUGGGAGGCUUAGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCACCCUUUAAUG

Length

84 nucleotides

Bulged bases

7ZP8|1|b|G|2112, 7ZP8|1|b|G|2123, 7ZP8|1|b|U|2130, 7ZP8|1|b|U|2131, 7ZP8|1|b|G|2144, 7ZP8|1|b|A|2147, 7ZP8|1|b|U|2149, 7ZP8|1|b|G|2159, 7ZP8|1|b|G|2162

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZP8|1|b|C|2103
7ZP8|1|b|C|2104
7ZP8|1|b|U|2105
7ZP8|1|b|U|2106
7ZP8|1|b|G|2107
7ZP8|1|b|A|2108
7ZP8|1|b|U|2109
7ZP8|1|b|G|2110
7ZP8|1|b|U|2111
7ZP8|1|b|G|2112
7ZP8|1|b|U|2113
7ZP8|1|b|A|2114
7ZP8|1|b|G|2115
7ZP8|1|b|G|2116
7ZP8|1|b|A|2117
7ZP8|1|b|U|2118
7ZP8|1|b|A|2119
7ZP8|1|b|G|2120
7ZP8|1|b|G|2121
7ZP8|1|b|U|2122
7ZP8|1|b|G|2123
7ZP8|1|b|G|2124
7ZP8|1|b|G|2125
7ZP8|1|b|A|2126
7ZP8|1|b|G|2127
7ZP8|1|b|G|2128
7ZP8|1|b|C|2129
7ZP8|1|b|U|2130
7ZP8|1|b|U|2131
7ZP8|1|b|A|2132
7ZP8|1|b|G|2133
7ZP8|1|b|A|2134
7ZP8|1|b|A|2135
7ZP8|1|b|G|2136
7ZP8|1|b|U|2137
7ZP8|1|b|G|2138
7ZP8|1|b|U|2139
7ZP8|1|b|G|2140
7ZP8|1|b|G|2141
7ZP8|1|b|A|2142
7ZP8|1|b|C|2143
7ZP8|1|b|G|2144
7ZP8|1|b|C|2145
7ZP8|1|b|C|2146
7ZP8|1|b|A|2147
7ZP8|1|b|G|2148
7ZP8|1|b|U|2149
7ZP8|1|b|C|2150
7ZP8|1|b|U|2151
7ZP8|1|b|G|2152
7ZP8|1|b|C|2153
7ZP8|1|b|A|2154
7ZP8|1|b|U|2155
7ZP8|1|b|G|2156
7ZP8|1|b|G|2157
7ZP8|1|b|A|2158
7ZP8|1|b|G|2159
7ZP8|1|b|C|2160
7ZP8|1|b|C|2161
7ZP8|1|b|G|2162
7ZP8|1|b|A|2163
7ZP8|1|b|C|2164
7ZP8|1|b|C|2165
7ZP8|1|b|U|2166
7ZP8|1|b|U|2167
7ZP8|1|b|G|2168
7ZP8|1|b|A|2169
7ZP8|1|b|A|2170
7ZP8|1|b|A|2171
7ZP8|1|b|U|2172
7ZP8|1|b|A|2173
7ZP8|1|b|C|2174
7ZP8|1|b|C|2175
7ZP8|1|b|A|2176
7ZP8|1|b|C|2177
7ZP8|1|b|C|2178
7ZP8|1|b|C|2179
7ZP8|1|b|U|2180
7ZP8|1|b|U|2181
7ZP8|1|b|U|2182
7ZP8|1|b|A|2183
7ZP8|1|b|A|2184
7ZP8|1|b|U|2185
7ZP8|1|b|G|2186

Current chains

Chain b

23S rRNA

Nearby chains