HL_7ZPQ_007

3D structure

PDB id

7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

7ZPQ|1|2|U|277

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZPQ_007 not in the Motif Atlas

Geometric match to HL_5TBW_068

Geometric discrepancy: 0.2157

The information below is about HL_5TBW_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_43793.1

Basepair signature

cWW-F

Number of instances in this motif group

50

Unit IDs

7ZPQ|1|2|C|276
7ZPQ|1|2|U|277
7ZPQ|1|2|U|278
7ZPQ|1|2|G|279

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain BV

RPL24A isoform 1