HL_7ZPQ_044
3D structure
- PDB id
- 7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- CAACCG
- Length
- 6 nucleotides
- Bulged bases
- 7ZPQ|1|5|C|73
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZPQ_044 not in the Motif Atlas
- Homologous match to HL_8C3A_002
- Geometric discrepancy: 0.1097
- The information below is about HL_8C3A_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_22523.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
7ZPQ|1|5|C|69
7ZPQ|1|5|A|70
7ZPQ|1|5|A|71
7ZPQ|1|5|C|72
7ZPQ|1|5|C|73
7ZPQ|1|5|G|74
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BK
- 60S ribosomal protein L13-A
- Chain BM
- 60S ribosomal protein L15-A
- Chain BZ
- 60S ribosomal protein L28
- Chain Bh
- 60S ribosomal protein L36-A
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