HL_7ZPQ_111

3D structure

PDB id

7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZPQ_111 not in the Motif Atlas

Geometric match to HL_4WF9_037

Geometric discrepancy: 0.2414

The information below is about HL_4WF9_037

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

7ZPQ|1|5|C|3194
7ZPQ|1|5|U|3195
7ZPQ|1|5|U|3196
7ZPQ|1|5|G|3197

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BH

60S ribosomal protein L9-A

Chain BL

60S ribosomal protein L14-A