HL_7ZPQ_114

3D structure

PDB id

7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

7ZPQ|1|5|U|3351

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZPQ_114 not in the Motif Atlas

Homologous match to HL_5TBW_071

Geometric discrepancy: 0.3287

The information below is about HL_5TBW_071

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_43793.1

Basepair signature

cWW-F

Number of instances in this motif group

50

Unit IDs

7ZPQ|1|5|C|3350
7ZPQ|1|5|U|3351
7ZPQ|1|5|U|3352
7ZPQ|1|5|G|3353

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AI

40S ribosomal protein S8