HL_7ZQ5_006

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

7ZQ5|1|b|U|139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZQ5_006 not in the Motif Atlas

Geometric match to HL_4PDB_001

Geometric discrepancy: 0.1274

The information below is about HL_4PDB_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7ZQ5|1|b|U|137
7ZQ5|1|b|U|138
7ZQ5|1|b|U|139
7ZQ5|1|b|C|140
7ZQ5|1|b|G|141
7ZQ5|1|b|A|142

Current chains

Chain b

23S rRNA

Nearby chains

Chain t

50S ribosomal protein L23