HL_7ZQ5_020

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGAAUAG

Length

7 nucleotides

Bulged bases

7ZQ5|1|b|U|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZQ5_020 not in the Motif Atlas

Geometric match to HL_5J7L_151

Geometric discrepancy: 0.1976

The information below is about HL_5J7L_151

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80922.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

3

Unit IDs

7ZQ5|1|b|C|611
7ZQ5|1|b|G|612
7ZQ5|1|b|A|613
7ZQ5|1|b|A|614
7ZQ5|1|b|U|615
7ZQ5|1|b|A|616
7ZQ5|1|b|G|617

Current chains

Chain b

23S rRNA

Nearby chains

Chain e

50S ribosomal protein L4