HL_7ZQ5_030

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GCUUAGAAGCAGC

Length

13 nucleotides

Bulged bases

7ZQ5|1|b|A|1067

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZQ5_030 not in the Motif Atlas

Geometric match to HL_4KR9_003

Geometric discrepancy: 0.3538

The information below is about HL_4KR9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70782.2

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7ZQ5|1|b|G|1063
7ZQ5|1|b|C|1064
7ZQ5|1|b|U|1065
7ZQ5|1|b|U|1066
7ZQ5|1|b|A|1067
7ZQ5|1|b|G|1068
7ZQ5|1|b|A|1069
7ZQ5|1|b|A|1070
7ZQ5|1|b|G|1071
7ZQ5|1|b|C|1072
7ZQ5|1|b|A|1073
7ZQ5|1|b|G|1074
7ZQ5|1|b|C|1075

Current chains

Chain b

23S rRNA

Nearby chains