HL_7ZQ5_031

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AGCGUAAUAGCU

Length

12 nucleotides

Bulged bases

7ZQ5|1|b|A|1095

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZQ5_031 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.2978

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.3

Basepair signature

cWW-F

Number of instances in this motif group

5

Unit IDs

7ZQ5|1|b|A|1090
7ZQ5|1|b|G|1091
7ZQ5|1|b|C|1092
7ZQ5|1|b|G|1093
7ZQ5|1|b|U|1094
7ZQ5|1|b|A|1095
7ZQ5|1|b|A|1096
7ZQ5|1|b|U|1097
7ZQ5|1|b|A|1098
7ZQ5|1|b|G|1099
7ZQ5|1|b|C|1100
7ZQ5|1|b|U|1101

Current chains

Chain b

23S rRNA

Nearby chains

Chain 8

50S ribosomal protein L36

Chain g

50S ribosomal protein L6