3D structure

PDB id
7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S E. coli ribosome with truncated uL23 and uL24 loops
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
CUGGGGCGG
Length
9 nucleotides
Bulged bases
7ZQ5|1|b|G|2250
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7ZQ5_055 not in the Motif Atlas
Geometric match to HL_4WF9_049
Geometric discrepancy: 0.1218
The information below is about HL_4WF9_049
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_85367.2
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
11

Unit IDs

7ZQ5|1|b|C|2248
7ZQ5|1|b|U|2249
7ZQ5|1|b|G|2250
7ZQ5|1|b|G|2251
7ZQ5|1|b|G|2252
7ZQ5|1|b|G|2253
7ZQ5|1|b|C|2254
7ZQ5|1|b|G|2255
7ZQ5|1|b|G|2256

Current chains

Chain b
23S rRNA

Nearby chains

Chain m
50S ribosomal protein L16
Chain y
50S ribosomal protein L27

Coloring options:


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