HL_7ZQ5_072
3D structure
- PDB id
- 7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with truncated uL23 and uL24 loops
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- ACCCCAUGCCGAACU
- Length
- 15 nucleotides
- Bulged bases
- 7ZQ5|1|a|G|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZQ5_072 not in the Motif Atlas
- Homologous match to HL_5J7L_215
- Geometric discrepancy: 0.129
- The information below is about HL_5J7L_215
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97756.2
- Basepair signature
- cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
7ZQ5|1|a|A|34
7ZQ5|1|a|C|35
7ZQ5|1|a|C|36
7ZQ5|1|a|C|37
7ZQ5|1|a|C|38
7ZQ5|1|a|A|39
7ZQ5|1|a|U|40
7ZQ5|1|a|G|41
7ZQ5|1|a|C|42
7ZQ5|1|a|C|43
7ZQ5|1|a|G|44
7ZQ5|1|a|A|45
7ZQ5|1|a|A|46
7ZQ5|1|a|C|47
7ZQ5|1|a|U|48
Current chains
- Chain a
- 5S rRNA
Nearby chains
- Chain b
- Large subunit ribosomal RNA; LSU rRNA
- Chain f
- 50S ribosomal protein L5
- Chain o
- 50S ribosomal protein L18
Coloring options: