HL_7ZQ5_074

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CCUUGAUGUGUAGGAUAGGUGGGAGGCUUAGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCACCCUUUAAUG

Length

84 nucleotides

Bulged bases

7ZQ5|1|b|G|2123, 7ZQ5|1|b|G|2124, 7ZQ5|1|b|U|2130, 7ZQ5|1|b|U|2131, 7ZQ5|1|b|A|2147, 7ZQ5|1|b|U|2149, 7ZQ5|1|b|G|2159, 7ZQ5|1|b|G|2162, 7ZQ5|1|b|C|2164, 7ZQ5|1|b|C|2178

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZQ5|1|b|C|2103
7ZQ5|1|b|C|2104
7ZQ5|1|b|U|2105
7ZQ5|1|b|U|2106
7ZQ5|1|b|G|2107
7ZQ5|1|b|A|2108
7ZQ5|1|b|U|2109
7ZQ5|1|b|G|2110
7ZQ5|1|b|U|2111
7ZQ5|1|b|G|2112
7ZQ5|1|b|U|2113
7ZQ5|1|b|A|2114
7ZQ5|1|b|G|2115
7ZQ5|1|b|G|2116
7ZQ5|1|b|A|2117
7ZQ5|1|b|U|2118
7ZQ5|1|b|A|2119
7ZQ5|1|b|G|2120
7ZQ5|1|b|G|2121
7ZQ5|1|b|U|2122
7ZQ5|1|b|G|2123
7ZQ5|1|b|G|2124
7ZQ5|1|b|G|2125
7ZQ5|1|b|A|2126
7ZQ5|1|b|G|2127
7ZQ5|1|b|G|2128
7ZQ5|1|b|C|2129
7ZQ5|1|b|U|2130
7ZQ5|1|b|U|2131
7ZQ5|1|b|A|2132
7ZQ5|1|b|G|2133
7ZQ5|1|b|A|2134
7ZQ5|1|b|A|2135
7ZQ5|1|b|G|2136
7ZQ5|1|b|U|2137
7ZQ5|1|b|G|2138
7ZQ5|1|b|U|2139
7ZQ5|1|b|G|2140
7ZQ5|1|b|G|2141
7ZQ5|1|b|A|2142
7ZQ5|1|b|C|2143
7ZQ5|1|b|G|2144
7ZQ5|1|b|C|2145
7ZQ5|1|b|C|2146
7ZQ5|1|b|A|2147
7ZQ5|1|b|G|2148
7ZQ5|1|b|U|2149
7ZQ5|1|b|C|2150
7ZQ5|1|b|U|2151
7ZQ5|1|b|G|2152
7ZQ5|1|b|C|2153
7ZQ5|1|b|A|2154
7ZQ5|1|b|U|2155
7ZQ5|1|b|G|2156
7ZQ5|1|b|G|2157
7ZQ5|1|b|A|2158
7ZQ5|1|b|G|2159
7ZQ5|1|b|C|2160
7ZQ5|1|b|C|2161
7ZQ5|1|b|G|2162
7ZQ5|1|b|A|2163
7ZQ5|1|b|C|2164
7ZQ5|1|b|C|2165
7ZQ5|1|b|U|2166
7ZQ5|1|b|U|2167
7ZQ5|1|b|G|2168
7ZQ5|1|b|A|2169
7ZQ5|1|b|A|2170
7ZQ5|1|b|A|2171
7ZQ5|1|b|U|2172
7ZQ5|1|b|A|2173
7ZQ5|1|b|C|2174
7ZQ5|1|b|C|2175
7ZQ5|1|b|A|2176
7ZQ5|1|b|C|2177
7ZQ5|1|b|C|2178
7ZQ5|1|b|C|2179
7ZQ5|1|b|U|2180
7ZQ5|1|b|U|2181
7ZQ5|1|b|U|2182
7ZQ5|1|b|A|2183
7ZQ5|1|b|A|2184
7ZQ5|1|b|U|2185
7ZQ5|1|b|G|2186

Current chains

Chain b

23S rRNA

Nearby chains