HL_7ZQ6_003
3D structure
- PDB id
- 7ZQ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GUUCGAGUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZQ6_003 not in the Motif Atlas
- Geometric match to HL_3RG5_008
- Geometric discrepancy: 0.1944
- The information below is about HL_3RG5_008
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.9
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
7ZQ6|1|M|G|53
7ZQ6|1|M|U|54
7ZQ6|1|M|U|55
7ZQ6|1|M|C|56
7ZQ6|1|M|G|57
7ZQ6|1|M|A|58
7ZQ6|1|M|G|59
7ZQ6|1|M|U|60
7ZQ6|1|M|C|61
Current chains
- Chain M
- Gly-tRNA
Nearby chains
- Chain b
- Large subunit ribosomal RNA; LSU rRNA
- Chain f
- 50S ribosomal protein L5
- Chain m
- 50S ribosomal protein L16
Coloring options: