RNA 3D Hub //

7ZQ6 Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_7ZQ6_0011/M/13:22No text annotation
geometric
HL_1N78_001
HL_78347.5
HL_7ZQ6_0021/M/31:39tRNA anticodon loop
geometric
HL_7U2I_104
NA
HL_7ZQ6_0031/M/53:61T-loop with 2 stacked bulged bases
geometric
HL_3RG5_008
HL_33597.1
HL_7ZQ6_0751/a/34:48No text annotation
homologous
HL_5J7L_215
NA
HL_7ZQ6_0041/a/38:44No text annotation
homologous
HL_5J7L_203
NA
HL_7ZQ6_0051/a/86:90Mini UNCG
homologous
HL_5J7L_204
NA
HL_7ZQ6_0061/b/59:68Pseudoknot with intercalation
homologous
HL_8VTW_001
NA
HL_7ZQ6_0071/b/87:95No text annotation
geometric
HL_2Y8W_001
NA
HL_7ZQ6_0081/b/123:128No text annotation
geometric
HL_4WF9_003
HL_75660.6
HL_7ZQ6_0091/b/137:142UNCG
geometric
HL_6QN3_001
NA
HL_7ZQ6_0101/b/158:168No text annotation
geometric
HL_5J7L_138
NA
HL_7ZQ6_0111/b/194:201No text annotation
geometric
HL_4WF9_006
HL_48677.1
HL_7ZQ6_0121/b/225:230No text annotation
geometric
HL_5J7L_140
NA
HL_7ZQ6_0131/b/246:252No text annotation
geometric
HL_5J7L_141
NA
HL_7ZQ6_0141/b/305:312T-loop with 2 stacked bulged bases
geometric
HL_5J7L_142
NA
HL_7ZQ6_0151/b/319:323No text annotation
geometric
HL_5J7L_143
NA
HL_7ZQ6_0161/b/327:335T-loop with unstacked turn
geometric
HL_5J7L_144
NA
HL_7ZQ6_0171/b/382:392No text annotation
geometric
HL_5J7L_145
NA
HL_7ZQ6_0181/b/410:417Pseudoknot geometry
geometric
HL_5J7L_146
NA
HL_7ZQ6_0191/b/462:467GNRA
geometric
HL_7RQB_015
NA
HL_7ZQ6_0201/b/487:493GNRA
geometric
HL_5J7L_148
NA
HL_7ZQ6_0211/b/544:549No text annotation
geometric
HL_5U3G_001
NA
HL_7ZQ6_0221/b/566:575T-loop with 2 stacked bulged bases
geometric
HL_5J7L_150
NA
HL_7ZQ6_0231/b/611:617No text annotation
geometric
HL_5J7L_151
NA
HL_7ZQ6_0241/b/629:634GNRA
geometric
HL_5J7L_152
NA
HL_7ZQ6_0251/b/641:647GNRA
geometric
HL_4WF9_021
HL_34789.1
HL_7ZQ6_0261/b/712:719GNRA wlth tandem sheared
geometric
HL_5J7L_154
NA
HL_7ZQ6_0271/b/744:753No text annotation
geometric
HL_7A0S_022
HL_50204.1
HL_7ZQ6_0281/b/779:785UNCG variation
geometric
HL_2NUE_001
NA
HL_7ZQ6_0291/b/826:831No text annotation
geometric
HL_7RQB_025
NA
HL_7ZQ6_0301/b/883:893No text annotation
HL_7ZQ6_0311/b/955:962GNRA
geometric
HL_4WF9_027
HL_34789.1
HL_7ZQ6_0321/b/978:985No text annotation
geometric
HL_5TBW_006
NA
HL_7ZQ6_0351/b/1170:1179No text annotation
HL_7ZQ6_0361/b/1222:1227GNRA
geometric
HL_5J7L_164
NA
HL_7ZQ6_0371/b/1281:1289T-loop with 2 stacked bulged bases
geometric
HL_5J7L_165
NA
HL_7ZQ6_0381/b/1324:1330Pseudoknot geometry with 3' bulge
geometric
HL_5J7L_166
NA
HL_7ZQ6_0391/b/1363:1368GNRA
geometric
HL_5J7L_167
NA
HL_7ZQ6_0401/b/1389:1398No text annotation
geometric
HL_5J7L_168
NA
HL_7ZQ6_0411/b/1451:1459Mini UNCG
geometric
HL_4L8H_001
HL_90436.1
HL_7ZQ6_0421/b/1492:1498Pseudoknot geometry with 3' bulge
geometric
HL_5J7L_170
NA
HL_7ZQ6_0441/b/1565:1568No text annotation
geometric
HL_7RQB_039
NA
HL_7ZQ6_0451/b/1612:1619No text annotation
geometric
HL_7RQB_040
NA
HL_7ZQ6_0461/b/1630:1636GNRA
geometric
HL_5J7L_174
NA
HL_7ZQ6_0471/b/1691:1696UNCG
geometric
HL_4WF9_040
HL_61337.1
HL_7ZQ6_0491/b/1752:1756No text annotation
geometric
HL_5J7L_177
NA
HL_7ZQ6_0501/b/1777:1787No text annotation
geometric
HL_5J7L_178
NA
HL_7ZQ6_0511/b/1806:1811GNRA related
geometric
HL_5J7L_179
NA
HL_7ZQ6_0521/b/1868:1873No text annotation
geometric
HL_1WZ2_007
HL_75660.6
HL_7ZQ6_0531/b/1910:1920No text annotation
geometric
HL_5TBW_049
NA
HL_7ZQ6_0541/b/1949:1957No text annotation
geometric
HL_5J7L_182
NA
HL_7ZQ6_0551/b/2027:2036No text annotation
geometric
HL_4WF9_047
HL_78372.1
HL_7ZQ6_0571/b/2209:2215No text annotation
geometric
HL_5J7L_185
NA
HL_7ZQ6_0581/b/2248:2256No text annotation
geometric
HL_4V9F_055
HL_11974.1
HL_7ZQ6_0591/b/2264:2276No text annotation
geometric
HL_5J7L_187
NA
HL_7ZQ6_0601/b/2303:2313No text annotation
geometric
HL_7RQB_055
NA
HL_7ZQ6_0611/b/2324:2331Pseudoknot geometry
geometric
HL_5J7L_189
NA
HL_7ZQ6_0621/b/2356:2361GNRA
geometric
HL_5J7L_190
NA
HL_7ZQ6_0631/b/2374:2379GNRA
homologous
HL_8VTW_057
NA
HL_7ZQ6_0641/b/2404:2413No text annotation
geometric
HL_5J7L_192
NA
HL_7ZQ6_0651/b/2471:2479No text annotation
geometric
HL_4V9F_062
HL_52011.1
HL_7ZQ6_0661/b/2528:2535GNRA variation
geometric
HL_5J7L_194
NA
HL_7ZQ6_0671/b/2551:2557No text annotation
geometric
HL_4WF9_058
HL_48677.1
HL_7ZQ6_0681/b/2594:2599GNRA
geometric
HL_4LFB_028
HL_34789.1
HL_7ZQ6_0691/b/2658:2663GNRA
geometric
HL_4V9F_066
HL_34789.1
HL_7ZQ6_0701/b/2701:2706Ribsomal LSU H95
geometric
HL_5J7L_198
NA
HL_7ZQ6_0711/b/2745:2759No text annotation
geometric
HL_5J7L_199
NA
HL_7ZQ6_0721/b/2796:2800No text annotation
geometric
HL_5J7L_176
NA
HL_7ZQ6_0731/b/2819:2827No text annotation
geometric
HL_5J7L_201
NA
HL_7ZQ6_0741/b/2856:2861GNRA
geometric
HL_5J7L_152
NA

Problematic loops

#loop idProblemSequence
HL_7ZQ6_033No text annotation
HL_7ZQ6_034No text annotation
HL_7ZQ6_043UNCG
HL_7ZQ6_048Mini UNCG
HL_7ZQ6_056No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_7ZQ6_0011/a/17:18,
1/a/65:67		Major groove intercalation
homologous
IL_5J7L_355
NA
IL_7ZQ6_0021/a/23:28,
1/a/56:60		No text annotation
homologous
IL_5J7L_356
NA
IL_7ZQ6_0031/a/30:31,
1/a/51:54		Major groove minor groove platform; mini C-loop
homologous
IL_5J7L_357
NA
IL_7ZQ6_0041/a/34:38,
1/a/44:48		Symmetric double minor groove platform
geometric
IL_5J7L_358
NA
IL_7ZQ6_0051/a/71:79,
1/a/97:105		Bacterial 5S Loop E
homologous
IL_5J7L_359
NA
IL_7ZQ6_0061/b/24:30,
1/b/510:516		Triple sheared with non-canonical cWW
geometric
IL_7RQB_001
NA
IL_7ZQ6_0071/b/36:37,
1/b/442:444		Single bulged A
geometric
IL_5J7L_246
NA
IL_7ZQ6_0081/b/43:44,
1/b/434:436		Minor groove platform
geometric
IL_5J7L_247
NA
IL_7ZQ6_0091/b/81:85,
1/b/97:105		No text annotation
homologous
IL_5J7L_248
NA
IL_7ZQ6_0101/b/183:184,
1/b/212:214		Single stack bend
geometric
IL_5J7L_249
NA
IL_7ZQ6_0111/b/188:194,
1/b/201:208		8x7 Sarcin-Ricin; G-bulge
geometric
IL_5J7L_250
NA
IL_7ZQ6_0121/b/239:245,
1/b/253:258		7x6 Sarcin-Ricin; G-bulge
geometric
IL_5J7L_251
NA
IL_7ZQ6_0131/b/269:271,
1/b/366:370		No text annotation
geometric
IL_5J7L_252
NA
IL_7ZQ6_0141/b/274:281,
1/b/359:363		No text annotation
homologous
IL_5J7L_253
NA
IL_7ZQ6_0151/b/293:295,
1/b/343:347		No text annotation
geometric
IL_4WF9_014
IL_76658.1
IL_7ZQ6_0161/b/481:484,
1/b/496:509		No text annotation
geometric
IL_5J7L_255
NA
IL_7ZQ6_0171/b/536:539,
1/b/554:557		Double sheared
geometric
IL_5J7L_256
NA
IL_7ZQ6_0181/b/564:566,
1/b/575:577		Isolated non-canonical cWW pair
geometric
IL_5J7L_257
NA
IL_7ZQ6_0191/b/606:610,
1/b/618:622		AAA cross-strand stack
geometric
IL_5J7L_258
NA
IL_7ZQ6_0201/b/672:674,
1/b/806:808		No text annotation
geometric
IL_7RQB_017
NA
IL_7ZQ6_0211/b/674:678,
1/b/799:806		tHW-tHW cross-strand stack
geometric
IL_7RQB_018
NA
IL_7ZQ6_0221/b/697:698,
1/b/763:765		Single bulged A
geometric
IL_5J7L_261
NA
IL_7ZQ6_0231/b/702:703,
1/b/728:730		Single bulged G
geometric
IL_5J7L_262
NA
IL_7ZQ6_0241/b/703:707,
1/b/724:728		Triple sheared
geometric
IL_7RQB_021
NA
IL_7ZQ6_0251/b/738:740,
1/b/757:758		Major groove platform
geometric
IL_5J7L_264
NA
IL_7ZQ6_0261/b/775:777,
1/b/787:791		Multiple bulged bases
geometric
IL_5J7L_265
NA
IL_7ZQ6_0271/b/844:848,
1/b/930:934		No text annotation
homologous
IL_5J7L_399
NA
IL_7ZQ6_0281/b/850:851,
1/b/926:928		Single stack bend
geometric
IL_5J7L_269
NA
IL_7ZQ6_0291/b/856:862,
1/b/915:921		7x7 Sarcin-Ricin with intercalated A; G-bulge
geometric
IL_5J7L_270
NA
IL_7ZQ6_0301/b/862:863,
1/b/913:915		Single bulged G
geometric
IL_5J7L_271
NA
IL_7ZQ6_0311/b/864:868,
1/b/909:912		C-loop with bulged stacked A's
geometric
IL_5J7L_272
NA
IL_7ZQ6_0321/b/870:872,
1/b/905:907		Isolated non-canonical cWW pair
geometric
IL_5J7L_273
NA
IL_7ZQ6_0331/b/875:879,
1/b/898:902		No text annotation
geometric
IL_4V88_390
NA
IL_7ZQ6_0341/b/880:881,
1/b/895:897		No text annotation
IL_7ZQ6_0351/b/994:996,
1/b/1159:1160		Single bulged C
geometric
IL_5J7L_276
NA
IL_7ZQ6_0361/b/998:1002,
1/b/1153:1157		UAA/GAN
geometric
IL_5J7L_277
NA
IL_7ZQ6_0371/b/1004:1011,
1/b/1150:1151		SSU/LSU pseudoknot
geometric
IL_5J7L_278
NA
IL_7ZQ6_0381/b/1011:1013,
1/b/1149:1150		Single bulged U
geometric
IL_4WF9_038
IL_97561.1
IL_7ZQ6_0391/b/1018:1024,
1/b/1140:1144		Kink-turn related
geometric
IL_4WF9_039
IL_57188.6
IL_7ZQ6_0401/b/1024:1030,
1/b/1124:1140		No text annotation
geometric
IL_5J7L_281
NA
IL_7ZQ6_0411/b/1031:1034,
1/b/1121:1123		Isolated non-canonical cWW pair
geometric
IL_5J7L_282
NA
IL_7ZQ6_0421/b/1038:1041,
1/b/1114:1117		Tandem non-canonical cWW pairs
geometric
IL_5J7L_283
NA
IL_7ZQ6_0431/b/1043:1051,
1/b/1108:1112		Kink-turn
geometric
IL_5J7L_284
NA
IL_7ZQ6_0441/b/1196:1198,
1/b/1247:1250		Isolated cWS basepair
geometric
IL_5J7L_286
NA
IL_7ZQ6_0451/b/1202:1206,
1/b/1240:1243		No text annotation
geometric
IL_5J7L_287
NA
IL_7ZQ6_0461/b/1208:1215,
1/b/1234:1238		Kink-turn
geometric
IL_5J7L_288
NA
IL_7ZQ6_0471/b/1262:1269,
1/b/2011:2017		8x7 Sarcin-Ricin; G-bulge
geometric
IL_5J7L_289
NA
IL_7ZQ6_0481/b/1310:1313,
1/b/1603:1604		Major groove platform; stack outside cWW
geometric
IL_7RQB_050
NA
IL_7ZQ6_0491/b/1319:1323,
1/b/1331:1333		C-loop
geometric
IL_5J7L_291
NA
IL_7ZQ6_0501/b/1351:1355,
1/b/1376:1380		UAA/GAN
geometric
IL_5J7L_292
NA
IL_7ZQ6_0511/b/1357:1361,
1/b/1370:1374		tSH-tHW-tHS
geometric
IL_5J7L_293
NA
IL_7ZQ6_0521/b/1415:1416,
1/b/1582:1587		No text annotation
geometric
IL_5J7L_294
NA
IL_7ZQ6_0531/b/1417:1421,
1/b/1577:1581		UAA/GAN
geometric
IL_5J7L_295
NA
IL_7ZQ6_0541/b/1432:1435,
1/b/1557:1561		Tandem non-canonical cWW pairs
geometric
IL_5J7L_296
NA
IL_7ZQ6_0551/b/1437:1440,
1/b/1551:1555		tSH-tHW
geometric
IL_5J7L_297
NA
IL_7ZQ6_0561/b/1450:1451,
1/b/1459:1461		Single bulged U
geometric
IL_5J7L_279
NA
IL_7ZQ6_0571/b/1468:1471,
1/b/1520:1524		No text annotation
geometric
IL_5J7L_299
NA
IL_7ZQ6_0581/b/1474:1478,
1/b/1513:1517		tSH-tHW-tHS
geometric
IL_5J7L_300
NA
IL_7ZQ6_0591/b/1481:1482,
1/b/1507:1510		No text annotation
IL_7ZQ6_0601/b/1489:1491,
1/b/1499:1500		Single bulged A
geometric
IL_5J7L_302
NA
IL_7ZQ6_0611/b/1526:1529,
1/b/1542:1546		UAA/GAN variation
geometric
IL_5J7L_303
NA
IL_7ZQ6_0621/b/1651:1656,
1/b/2004:2006		No text annotation
geometric
IL_5J7L_304
NA
IL_7ZQ6_0631/b/1663:1665,
1/b/1995:1997		Isolated tWW turn
geometric
IL_4WF9_063
IL_10432.1
IL_7ZQ6_0641/b/1666:1669,
1/b/1993:1994		Major groove platform; stack outside cWW
geometric
IL_7RQB_066
NA
IL_7ZQ6_1101/b/1666:1674,
1/b/1990:1994		No text annotation
homologous
IL_5J7L_386
NA
IL_7ZQ6_0651/b/1669:1674,
1/b/1990:1993		Intercalated tWH
geometric
IL_5J7L_307
NA
IL_7ZQ6_0661/b/1686:1691,
1/b/1696:1702		tSH-tSH-tHH-tHS
geometric
IL_5J7L_308
NA
IL_7ZQ6_0671/b/1712:1718,
1/b/1742:1746		6x5 Sarcin-Ricin; G-bulge
geometric
IL_5J7L_309
NA
IL_7ZQ6_0681/b/1720:1724,
1/b/1736:1740		Triple sheared
geometric
IL_5J7L_310
NA
IL_7ZQ6_0691/b/1727:1728,
1/b/1731:1733		Single bulged C
geometric
IL_5J7L_311
NA
IL_7ZQ6_0701/b/1770:1771,
1/b/1980:1982		Single bulged A
geometric
IL_5J7L_312
NA
IL_7ZQ6_0711/b/1798:1804,
1/b/1813:1821		Kink-turn related
geometric
IL_5J7L_313
NA
IL_7ZQ6_0721/b/1837:1840,
1/b/1902:1903		Minor groove platform, major groove intercalation
geometric
IL_5J7L_314
NA
IL_7ZQ6_0731/b/1841:1842,
1/b/1898:1901		Major groove intercalation
geometric
IL_4V9F_067
IL_71421.1
IL_7ZQ6_0741/b/1846:1849,
1/b/1893:1894		Major groove minor groove platform; mini C-loop
geometric
IL_1I6U_002
IL_73108.1
IL_7ZQ6_1111/b/1851:1860,
1/b/1882:1891		No text annotation
homologous
IL_5J7L_387
NA
IL_7ZQ6_0751/b/1864:1867,
1/b/1874:1878		UAA/GAN related
geometric
IL_5J7L_317
NA
IL_7ZQ6_0761/b/1933:1934,
1/b/1964:1967		Bulged stacked bases
geometric
IL_7RQB_076
NA
IL_7ZQ6_0771/b/1934:1945,
1/b/1961:1964		No text annotation
geometric
IL_7A0S_072
IL_04332.3
IL_7ZQ6_0781/b/2050:2052,
1/b/2617:2618		Major groove platform
geometric
IL_5J7L_320
NA
IL_7ZQ6_0791/b/2054:2056,
1/b/2612:2615		No text annotation
geometric
IL_5J7L_321
NA
IL_7ZQ6_0801/b/2067:2069,
1/b/2442:2443		Single bulged U
geometric
IL_4WF9_080
IL_97561.1
IL_7ZQ6_0811/b/2070:2071,
1/b/2438:2441		Minor groove platform
geometric
IL_5TBW_094
NA
IL_7ZQ6_0821/b/2081:2083,
1/b/2236:2239		Isolated tHS basepair with bulges
geometric
IL_5J7L_325
NA
IL_7ZQ6_0831/b/2085:2087,
1/b/2232:2234		Isolated non-canonical cWW pair
geometric
IL_5J7L_326
NA
IL_7ZQ6_0851/b/2202:2204,
1/b/2220:2221		Single bulged U
geometric
IL_5J7L_331
NA
IL_7ZQ6_0861/b/2297:2299,
1/b/2317:2321		No text annotation
geometric
IL_5J7L_332
NA
IL_7ZQ6_0871/b/2350:2353,
1/b/2364:2367		Double sheared
geometric
IL_5J7L_333
NA
IL_7ZQ6_0881/b/2401:2403,
1/b/2414:2415		Major groove intercalation
geometric
IL_3MXH_003
IL_97561.1
IL_7ZQ6_0891/b/2453:2454,
1/b/2498:2500		Single stack bend
geometric
IL_4WF9_089
IL_15011.1
IL_7ZQ6_0901/b/2454:2455,
1/b/2496:2498		Major groove platform
geometric
IL_7RQB_092
NA
IL_7ZQ6_0911/b/2457:2459,
1/b/2493:2494		Major groove platform
geometric
IL_4WF9_091
IL_48076.7
IL_7ZQ6_0921/b/2459:2461,
1/b/2489:2493		Major groove minor groove platform with extra cWW
geometric
IL_7RQB_094
NA
IL_7ZQ6_0931/b/2466:2470,
1/b/2480:2484		Double sheared with non-canonical cWW
geometric
IL_5J7L_338
NA
IL_7ZQ6_0941/b/2507:2508,
1/b/2580:2582		Major groove platform
geometric
IL_7RQB_096
NA
IL_7ZQ6_0951/b/2510:2512,
1/b/2574:2578		Isolated non-canonical cWW with bulges
geometric
IL_5J7L_340
NA
IL_7ZQ6_0961/b/2512:2513,
1/b/2571:2574		No text annotation
geometric
IL_5J7L_341
NA
IL_7ZQ6_0971/b/2522:2523,
1/b/2540:2543		Major groove platform with intercalation
geometric
IL_5J7L_342
NA
IL_7ZQ6_0981/b/2591:2592,
1/b/2601:2603		Single bulged A
geometric
IL_7RQB_101
NA
IL_7ZQ6_0991/b/2636:2640,
1/b/2774:2782		tSH-tHS-tHW
geometric
IL_5J7L_345
NA
IL_7ZQ6_1001/b/2652:2658,
1/b/2663:2668		Sarcin-Ricin target in LSU H95; G-bulge
geometric
IL_5J7L_346
NA
IL_7ZQ6_1011/b/2680:2684,
1/b/2725:2727		C-loop
geometric
IL_5J7L_347
NA
IL_7ZQ6_1021/b/2687:2691,
1/b/2718:2722		UAA/GAN related, with intercalation
geometric
IL_5J7L_348
NA
IL_7ZQ6_1031/b/2695:2696,
1/b/2711:2714		Multiple bulged bases
geometric
IL_5J7L_349
NA
IL_7ZQ6_1041/b/2737:2742,
1/b/2762:2767		UAA/GAN with extra cWW
geometric
IL_5J7L_350
NA
IL_7ZQ6_1051/b/2806:2811,
1/b/2889:2892		No text annotation
geometric
IL_5J7L_351
NA
IL_7ZQ6_1061/b/2838:2839,
1/b/2878:2880		Major groove intercalation
geometric
IL_5J7L_352
NA
IL_7ZQ6_1071/b/2843:2846,
1/b/2870:2874		Multiple bulged bases with non-canonical cWW
geometric
IL_5J7L_353
NA
IL_7ZQ6_1081/b/2847:2852,
1/b/2865:2869		tHS double platform
geometric
IL_5J7L_354
NA

Problematic loops

#loop idProblemSequence
IL_7ZQ6_109No text annotation
IL_7ZQ6_084No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_7ZQ6_0011/a/10:16,
1/a/68:70,
1/a/106:110		No text annotation
homologous
J3_5J7L_049
NA
J3_7ZQ6_0021/b/30:31,
1/b/474:481,
1/b/509:510		No text annotation
geometric
J3_8VTW_036
NA
J3_7ZQ6_0121/b/30:31,
1/b/474:484,
1/b/496:510		No text annotation
homologous
J3_9DFE_002
J3_17917.1
J3_7ZQ6_0131/b/32:35,
1/b/445:461,
1/b/468:473		No text annotation
homologous
J3_9DFE_003
J3_07616.1
J3_7ZQ6_0031/b/56:57,
1/b/70:76,
1/b/110:114		No text annotation
homologous
J3_5J7L_037
NA
J3_7ZQ6_0141/b/297:301,
1/b/316:325,
1/b/337:341		No text annotation
homologous
J3_5J7L_068
NA
J3_7ZQ6_0041/b/683:689,
1/b/773:775,
1/b/791:794		No text annotation
homologous
J3_8VTW_001
NA
J3_7ZQ6_0051/b/698:700,
1/b/732:736,
1/b/760:763		No text annotation
homologous
J3_8VTW_002
NA
J3_7ZQ6_0061/b/1298:1303,
1/b/1625:1627,
1/b/1639:1642		No text annotation
homologous
J3_8VTW_004
NA
J3_7ZQ6_0071/b/1306:1309,
1/b/1605:1611,
1/b/1620:1622		No text annotation
homologous
J3_8VTW_005
NA
J3_7ZQ6_0161/b/1344:1350,
1/b/1381:1385,
1/b/1402:1403		No text annotation
homologous
J3_7A0S_018
J3_94309.1
J3_7ZQ6_0171/b/1424:1429,
1/b/1564:1565,
1/b/1568:1574		No text annotation
homologous
J3_5J7L_069
NA
J3_7ZQ6_0081/b/2091:2093,
1/b/2196:2200,
1/b/2223:2228		No text annotation
homologous
J3_8VTW_006
NA
J3_7ZQ6_0181/b/2282:2284,
1/b/2384:2395,
1/b/2421:2427		No text annotation
homologous
J3_5J7L_070
NA
J3_7ZQ6_0091/b/2295:2297,
1/b/2321:2323,
1/b/2332:2337		No text annotation
homologous
J3_8VTW_007
NA
J3_7ZQ6_0191/b/2295:2299,
1/b/2317:2323,
1/b/2332:2337		No text annotation
homologous
J3_5J7L_071
NA
J3_7ZQ6_0201/b/2517:2520,
1/b/2545:2550,
1/b/2558:2567		No text annotation
J3_7ZQ6_0101/b/2789:2791,
1/b/2805:2806,
1/b/2892:2894		No text annotation
homologous
J3_5J7L_047
NA
J3_7ZQ6_0111/b/2812:2815,
1/b/2831:2836,
1/b/2882:2888		No text annotation
homologous
J3_5J7L_048
NA
J4_7ZQ6_0011/M/7:10,
1/M/25:27,
1/M/43:49,
1/M/65:66		tRNA junction
homologous
J4_1IL2_001
J4_58311.1
J4_7ZQ6_0021/b/268:269,
1/b/370:375,
1/b/399:406,
1/b/421:424		No text annotation
homologous
J4_5J7L_018
NA
J4_7ZQ6_0031/b/297:301,
1/b/316:319,
1/b/323:325,
1/b/337:341		No text annotation
homologous
J4_5J7L_019
NA
J4_7ZQ6_0041/b/601:604,
1/b/624:628,
1/b/635:638,
1/b/650:656		No text annotation
homologous
J4_5J7L_020
NA
J4_7ZQ6_0051/b/1270:1276,
1/b/1294:1295,
1/b/1645:1648,
1/b/2009:2010		No text annotation
homologous
J4_5J7L_021
NA
J4_7ZQ6_0061/b/1310:1314,
1/b/1338:1343,
1/b/1404:1405,
1/b/1597:1604		No text annotation
homologous
J4_5J7L_022
NA
J4_7ZQ6_0071/b/1313:1314,
1/b/1338:1343,
1/b/1404:1405,
1/b/1597:1603		No text annotation
homologous
J4_5J7L_023
NA
J4_7ZQ6_0081/b/1444:1445,
1/b/1466:1467,
1/b/1525:1526,
1/b/1546:1547		No text annotation
homologous
J4_5J7L_024
NA
J4_7ZQ6_0091/b/1772:1776,
1/b/1788:1792,
1/b/1827:1830,
1/b/1975:1979		No text annotation
homologous
J4_5J7L_025
NA
J4_7ZQ6_0101/b/1833:1835,
1/b/1905:1906,
1/b/1924:1933,
1/b/1967:1972		No text annotation
homologous
J4_9DFE_008
J4_42306.1
J4_7ZQ6_0111/b/2285:2289,
1/b/2343:2347,
1/b/2370:2372,
1/b/2381:2383		No text annotation
homologous
J4_5J7L_027
NA
J4_7ZQ6_0121/b/2643:2646,
1/b/2674:2676,
1/b/2731:2735,
1/b/2769:2771		No text annotation
homologous
J4_5J7L_028
NA
J5_7ZQ6_0011/b/47:54,
1/b/116:121,
1/b/130:131,
1/b/148:150,
1/b/176:178		No text annotation
homologous
J5_5J7L_013
NA
J5_7ZQ6_0021/b/531:533,
1/b/560:564,
1/b/577:579,
1/b/1261:1262,
1/b/2017:2018		No text annotation
homologous
J5_5J7L_014
NA
J5_7ZQ6_0031/b/584:589,
1/b/668:671,
1/b/809:812,
1/b/1195:1196,
1/b/1250:1256		No text annotation
homologous
J5_5J7L_015
NA
J5_7ZQ6_0041/b/1674:1682,
1/b/1706:1707,
1/b/1751:1752,
1/b/1756:1764,
1/b/1988:1990		No text annotation
homologous
J5_5J7L_016
NA
J5_7ZQ6_0051/b/2057:2064,
1/b/2446:2453,
1/b/2500:2506,
1/b/2583:2588,
1/b/2606:2611		No text annotation
J5_7ZQ6_0061/b/2074:2077,
1/b/2243:2246,
1/b/2258:2259,
1/b/2281:2282,
1/b/2427:2435		No text annotation
homologous
J5_4WF9_007
J5_39529.2
J6_7ZQ6_0011/b/45:46,
1/b/179:183,
1/b/214:224,
1/b/231:235,
1/b/262:266,
1/b/426:433		No text annotation
J6_7ZQ6_0021/b/2074:2077,
1/b/2243:2246,
1/b/2258:2259,
1/b/2281:2284,
1/b/2384:2395,
1/b/2421:2435		No text annotation
J7_7ZQ6_0011/b/8:15,
1/b/525:531,
1/b/2018:2023,
1/b/2040:2043,
1/b/2625:2630,
1/b/2788:2789,
1/b/2894:2895		No text annotation
J7_7ZQ6_0021/b/817:822,
1/b/835:838,
1/b/940:946,
1/b/971:976,
1/b/987:991,
1/b/1163:1164,
1/b/1185:1190		No text annotation

Problematic loops

#loop idProblemSequence
J3_7ZQ6_015No text annotation

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