HL_7ZQ6_040

3D structure

PDB id

7ZQ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

7ZQ6|1|b|U|1396, 7ZQ6|1|b|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZQ6_040 not in the Motif Atlas

Geometric match to HL_5J7L_168

Geometric discrepancy: 0.08

The information below is about HL_5J7L_168

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7ZQ6|1|b|G|1389
7ZQ6|1|b|U|1390
7ZQ6|1|b|U|1391
7ZQ6|1|b|A|1392
7ZQ6|1|b|A|1393
7ZQ6|1|b|U|1394
7ZQ6|1|b|A|1395
7ZQ6|1|b|U|1396
7ZQ6|1|b|U|1397
7ZQ6|1|b|C|1398

Current chains

Chain b

23S rRNA

Nearby chains

Chain t

50S ribosomal protein L23