HL_7ZRS_013

3D structure

PDB id

7ZRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

CAUUCG

Length

6 nucleotides

Bulged bases

7ZRS|1|2|A|492, 7ZRS|1|2|U|493

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZRS_013 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3754

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7ZRS|1|2|C|491
7ZRS|1|2|A|492
7ZRS|1|2|U|493
7ZRS|1|2|U|494
7ZRS|1|2|C|495
7ZRS|1|2|G|496

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain CA

RQC trigger complex helicase SLH1