HL_7ZRS_049
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- GUGAGAAUC
- Length
- 9 nucleotides
- Bulged bases
- 7ZRS|1|5|G|218, 7ZRS|1|5|A|219, 7ZRS|1|5|G|220
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZRS_049 not in the Motif Atlas
- Homologous match to HL_5TBW_007
- Geometric discrepancy: 0.0904
- The information below is about HL_5TBW_007
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_08002.12
- Basepair signature
- cWW-cWW-F-tWH
- Number of instances in this motif group
- 16
Unit IDs
7ZRS|1|5|G|216
7ZRS|1|5|U|217
7ZRS|1|5|G|218
7ZRS|1|5|A|219
7ZRS|1|5|G|220
7ZRS|1|5|A|221
7ZRS|1|5|A|222
7ZRS|1|5|U|223
7ZRS|1|5|C|224
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BC
- RPL4A isoform 1
- Chain BX
- 60S ribosomal protein L26-A
Coloring options: