HL_7ZRS_064

3D structure

PDB id

7ZRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

CCUCAG

Length

6 nucleotides

Bulged bases

7ZRS|1|5|C|960, 7ZRS|1|5|A|963

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZRS_064 not in the Motif Atlas

Homologous match to HL_8C3A_022

Geometric discrepancy: 0.1084

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7ZRS|1|5|C|959
7ZRS|1|5|C|960
7ZRS|1|5|U|961
7ZRS|1|5|C|962
7ZRS|1|5|A|963
7ZRS|1|5|G|964

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BZ

60S ribosomal protein L28

Chain Ba

60S ribosomal protein L29

Chain Bn

60S ribosomal protein L42-A