HL_7ZRS_104

3D structure

PDB id

7ZRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

CGUUCAUAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZRS_104 not in the Motif Atlas

Homologous match to HL_5TBW_061

Geometric discrepancy: 0.1051

The information below is about HL_5TBW_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_82661.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7ZRS|1|5|C|2841
7ZRS|1|5|G|2842
7ZRS|1|5|U|2843
7ZRS|1|5|U|2844
7ZRS|1|5|C|2845
7ZRS|1|5|A|2846
7ZRS|1|5|U|2847
7ZRS|1|5|A|2848
7ZRS|1|5|G|2849

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BI

RPL10 isoform 1

Chain Bl

60S ribosomal protein L40-A