HL_7ZS5_039

3D structure

PDB id

7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUUAUC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZS5_039 not in the Motif Atlas

Homologous match to HL_5TBW_038

Geometric discrepancy: 0.1165

The information below is about HL_5TBW_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75033.1

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

7ZS5|1|1|G|1719
7ZS5|1|1|U|1720
7ZS5|1|1|U|1721
7ZS5|1|1|U|1722
7ZS5|1|1|A|1723
7ZS5|1|1|U|1724
7ZS5|1|1|C|1725

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain BB

60S ribosomal protein L43-A

Chain BS

60S ribosomal protein L19-A