Motif HL_75033.1 Version HL_75033.1 of this group appears in releases 3.89 to 3.89
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5TBW_038 | 5TBW | 0.1650 | 0 | 1 | LSU rRNA | G | 1719 | U | 1720 | U | 1721 | U | 1722 | A | 1723 | U | 1724 | C | 1725 | cWW | cwW |
| 2 | HL_8C3A_038 | 8C3A | 0.0000 | 0 | 1 | LSU rRNA | G | 1715 | U | 1716 | U | 1717 | U | 1718 | A | 1719 | U | 1720 | C | 1721 | cWW | cwW |
| 3 | HL_5TBW_228 | 5TBW | 0.5684 | 1 | 1 | LSU rRNA | C | 1759 | A | 1760 | C | 1761 | C | 1762 | U | 1763 | U | 1765 | G | 1766 | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUUAUC | 2 |
| CACCUUUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUUAU | 2 |
| ACCUUU | 1 |
Release history
| Release | 3.89 |
|---|---|
| Date | 2024-10-09 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-cWW-F-F-F
- Heat map statistics
- Min 0.17 | Avg 0.30 | Max 0.61
Coloring options: