HL_7ZS5_050

3D structure

PDB id

7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUAACUAUGAC

Length

11 nucleotides

Bulged bases

7ZS5|1|1|A|2256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZS5_050 not in the Motif Atlas

Homologous match to HL_5TBW_049

Geometric discrepancy: 0.3732

The information below is about HL_5TBW_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84702.1

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7ZS5|1|1|G|2253
7ZS5|1|1|U|2254
7ZS5|1|1|A|2255
7ZS5|1|1|A|2256
7ZS5|1|1|C|2257
7ZS5|1|1|U|2258
7ZS5|1|1|A|2259
7ZS5|1|1|U|2260
7ZS5|1|1|G|2261
7ZS5|1|1|A|2262
7ZS5|1|1|C|2263

Current chains

Chain 1

25S ribosomal RNA

Nearby chains