HL_7ZS5_068

3D structure

PDB id

7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAUCA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZS5_068 not in the Motif Atlas

Homologous match to HL_8C3A_067

Geometric discrepancy: 0.0854

The information below is about HL_8C3A_067

Detailed Annotation

Ribsomal LSU H95

Broad Annotation

Ribsomal LSU H95

Motif group

HL_65794.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7ZS5|1|1|U|3068
7ZS5|1|1|G|3069
7ZS5|1|1|A|3070
7ZS5|1|1|U|3071
7ZS5|1|1|C|3072
7ZS5|1|1|A|3073

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain BS

60S ribosomal protein L19-A

Chain BV

60S ribosomal protein L22-A

Chain Be

60S ribosomal protein L31-A