HL_7ZS5_081
3D structure
- PDB id
- 7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CACAUUG
- Length
- 7 nucleotides
- Bulged bases
- 7ZS5|1|4|A|111, 7ZS5|1|4|U|113
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZS5_081 not in the Motif Atlas
- Homologous match to HL_5TBW_075
- Geometric discrepancy: 0.2883
- The information below is about HL_5TBW_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_22523.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
7ZS5|1|4|C|108
7ZS5|1|4|A|109
7ZS5|1|4|C|110
7ZS5|1|4|A|111
7ZS5|1|4|U|112
7ZS5|1|4|U|113
7ZS5|1|4|G|114
Current chains
- Chain 4
- 5.8S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain BY
- 60S ribosomal protein L25
- Chain Bk
- 60S ribosomal protein L37-A
- Chain Bm
- 60S ribosomal protein L39
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