HL_7ZTA_001

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAUGCCG

Length

7 nucleotides

Bulged bases

7ZTA|1|05S1|G|41

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_001 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.0855

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

7ZTA|1|05S1|C|38
7ZTA|1|05S1|A|39
7ZTA|1|05S1|U|40
7ZTA|1|05S1|G|41
7ZTA|1|05S1|C|42
7ZTA|1|05S1|C|43
7ZTA|1|05S1|G|44

Current chains

Chain 05S1

5S ribosomal RNA

Nearby chains

Chain 23S1

Large subunit ribosomal RNA; LSU rRNA

Chain L051

50S ribosomal protein L5

Chain L181

50S ribosomal protein L18

Chain L311

50S ribosomal protein L31