HL_7ZTA_014

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_014 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2414

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7ZTA|1|16S1|G|462
7ZTA|1|16S1|U|463
7ZTA|1|16S1|U|464
7ZTA|1|16S1|A|465
7ZTA|1|16S1|A|466
7ZTA|1|16S1|U|467
7ZTA|1|16S1|A|468
7ZTA|1|16S1|C|469
7ZTA|1|16S1|C|470

Current chains

Chain 16S1

16S ribosomal RNA

Nearby chains