HL_7ZTA_029

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UGAUAAA

Length

7 nucleotides

Bulged bases

7ZTA|1|16S1|U|1168

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_029 not in the Motif Atlas

Homologous match to HL_4LFB_027

Geometric discrepancy: 0.2855

The information below is about HL_4LFB_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7ZTA|1|16S1|U|1165
7ZTA|1|16S1|G|1166
7ZTA|1|16S1|A|1167
7ZTA|1|16S1|U|1168
7ZTA|1|16S1|A|1169
7ZTA|1|16S1|A|1170
7ZTA|1|16S1|A|1171

Current chains

Chain 16S1

16S ribosomal RNA

Nearby chains

Chain S021

30S ribosomal protein S2