HL_7ZTA_040

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7ZTA|1|23S1|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_040 not in the Motif Atlas

Geometric match to HL_5J7L_139

Geometric discrepancy: 0.1013

The information below is about HL_5J7L_139

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7ZTA|1|23S1|G|194
7ZTA|1|23S1|A|195
7ZTA|1|23S1|A|196
7ZTA|1|23S1|A|197
7ZTA|1|23S1|C|198
7ZTA|1|23S1|A|199
7ZTA|1|23S1|U|200
7ZTA|1|23S1|C|201

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L151

50S ribosomal protein L15

Chain L281

50S ribosomal protein L28