HL_7ZTA_042

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_042 not in the Motif Atlas

Homologous match to HL_5J7L_141

Geometric discrepancy: 0.0753

The information below is about HL_5J7L_141

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37369.2

Basepair signature

cWW-tSH-F-F-F

Number of instances in this motif group

9

Unit IDs

7ZTA|1|23S1|C|246
7ZTA|1|23S1|G|247
7ZTA|1|23S1|G|248
7ZTA|1|23S1|C|249
7ZTA|1|23S1|G|250
7ZTA|1|23S1|A|251
7ZTA|1|23S1|G|252

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L151

50S ribosomal protein L15

Chain L281

50S ribosomal protein L28

Chain L351

50S ribosomal protein L35