HL_7ZTA_050

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UUAG

Length

4 nucleotides

Bulged bases

7ZTA|1|23S1|U|546

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_050 not in the Motif Atlas

Homologous match to HL_7A0S_017

Geometric discrepancy: 0.3556

The information below is about HL_7A0S_017

Detailed Annotation

Mini UNCG with extended bulge

Broad Annotation

Mini UNCG with extended bulge

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7ZTA|1|23S1|U|545
7ZTA|1|23S1|U|546
7ZTA|1|23S1|A|547
7ZTA|1|23S1|G|548

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L211

50S ribosomal protein L21