HL_7ZTA_052

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGAAUAG

Length

7 nucleotides

Bulged bases

7ZTA|1|23S1|A|613, 7ZTA|1|23S1|U|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_052 not in the Motif Atlas

Homologous match to HL_5J7L_151

Geometric discrepancy: 0.0995

The information below is about HL_5J7L_151

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80922.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

3

Unit IDs

7ZTA|1|23S1|C|611
7ZTA|1|23S1|G|612
7ZTA|1|23S1|A|613
7ZTA|1|23S1|A|614
7ZTA|1|23S1|U|615
7ZTA|1|23S1|A|616
7ZTA|1|23S1|G|617

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L041

50S ribosomal protein L4