HL_7ZTA_054

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UUAACUG

Length

7 nucleotides

Bulged bases

7ZTA|1|23S1|U|646

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_054 not in the Motif Atlas

Homologous match to HL_5J7L_153

Geometric discrepancy: 0.2995

The information below is about HL_5J7L_153

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13529.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7ZTA|1|23S1|U|641
7ZTA|1|23S1|U|642
7ZTA|1|23S1|A|643
7ZTA|1|23S1|A|644
7ZTA|1|23S1|C|645
7ZTA|1|23S1|U|646
7ZTA|1|23S1|G|647

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L331

50S ribosomal protein L33

Chain L351

50S ribosomal protein L35