HL_7ZTA_061

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_061 not in the Motif Atlas

Homologous match to HL_5J7L_160

Geometric discrepancy: 0.1018

The information below is about HL_5J7L_160

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_42998.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7ZTA|1|23S1|G|978
7ZTA|1|23S1|A|979
7ZTA|1|23S1|A|980
7ZTA|1|23S1|A|981
7ZTA|1|23S1|C|982
7ZTA|1|23S1|A|983
7ZTA|1|23S1|A|984
7ZTA|1|23S1|C|985

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L201

50S ribosomal protein L20

Chain L211

50S ribosomal protein L21

Chain L301

50S ribosomal protein L30