HL_7ZTA_074

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGACAC(6MZ)G

Length

8 nucleotides

Bulged bases

7ZTA|1|23S1|A|1614, 7ZTA|1|23S1|A|1616

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_074 not in the Motif Atlas

Homologous match to HL_5J7L_173

Geometric discrepancy: 0.0696

The information below is about HL_5J7L_173

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89567.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

8

Unit IDs

7ZTA|1|23S1|C|1612
7ZTA|1|23S1|G|1613
7ZTA|1|23S1|A|1614
7ZTA|1|23S1|C|1615
7ZTA|1|23S1|A|1616
7ZTA|1|23S1|C|1617
7ZTA|1|23S1|6MZ|1618
7ZTA|1|23S1|G|1619

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L221

50S ribosomal protein L22

Chain L341

50S ribosomal protein L34