HL_7ZTA_085

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGCCAG

Length

6 nucleotides

Bulged bases

7ZTA|1|23S1|C|2145

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_085 not in the Motif Atlas

Homologous match to HL_3U4M_001

Geometric discrepancy: 0.1298

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

7ZTA|1|23S1|C|2143
7ZTA|1|23S1|G|2144
7ZTA|1|23S1|C|2145
7ZTA|1|23S1|C|2146
7ZTA|1|23S1|A|2147
7ZTA|1|23S1|G|2148

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain S111

30S ribosomal protein S11