HL_7ZTA_087

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUG(OMG)GGCGG

Length

9 nucleotides

Bulged bases

7ZTA|1|23S1|G|2250

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_087 not in the Motif Atlas

Homologous match to HL_7RQB_053

Geometric discrepancy: 0.0909

The information below is about HL_7RQB_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZTA|1|23S1|C|2248
7ZTA|1|23S1|U|2249
7ZTA|1|23S1|G|2250
7ZTA|1|23S1|OMG|2251
7ZTA|1|23S1|G|2252
7ZTA|1|23S1|G|2253
7ZTA|1|23S1|C|2254
7ZTA|1|23S1|G|2255
7ZTA|1|23S1|G|2256

Current chains

Chain 23S1

23S ribosomal RNA

Nearby chains

Chain L161

50S ribosomal protein L16

Chain L271

50S ribosomal protein L27

Chain PTR1

Transfer RNA; tRNA