HL_7ZTA_107

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAAG(OMG)GAAG

Length

9 nucleotides

Bulged bases

7ZTA|1|ETR1|G|18

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZTA_107 not in the Motif Atlas

Homologous match to HL_1SER_001

Geometric discrepancy: 0.5218

The information below is about HL_1SER_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40252.3

Basepair signature

cWW-tSH-cWS-F

Number of instances in this motif group

5

Unit IDs

7ZTA|1|ETR1|C|12
7ZTA|1|ETR1|A|13
7ZTA|1|ETR1|A|14
7ZTA|1|ETR1|G|15
7ZTA|1|ETR1|OMG|17
7ZTA|1|ETR1|G|18
7ZTA|1|ETR1|A|20
7ZTA|1|ETR1|A|21
7ZTA|1|ETR1|G|22

Current chains

Chain ETR1

tRNA-Gln

Nearby chains

Chain 23S1

Large subunit ribosomal RNA; LSU rRNA