HL_7ZTA_111
3D structure
- PDB id
- 7ZTA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GACU(U8U)UU(T6A)A(PSU)C
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: U8U, T6A, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZTA_111 not in the Motif Atlas
- Homologous match to HL_1FIR_002
- Geometric discrepancy: 0.1806
- The information below is about HL_1FIR_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZTA|1|PTR1|G|30
7ZTA|1|PTR1|A|31
7ZTA|1|PTR1|C|32
7ZTA|1|PTR1|U|33
7ZTA|1|PTR1|U8U|34
7ZTA|1|PTR1|U|35
7ZTA|1|PTR1|U|36
7ZTA|1|PTR1|T6A|37
7ZTA|1|PTR1|A|38
7ZTA|1|PTR1|PSU|39
7ZTA|1|PTR1|C|40
Current chains
- Chain PTR1
- tRNA-Lys
Nearby chains
- Chain 16S1
- Small subunit ribosomal RNA; SSU rRNA
- Chain ETR1
- Transfer RNA; tRNA
- Chain MRN1
- mRNA
- Chain S091
- 30S ribosomal protein S9
Coloring options: