HL_7ZTA_118
3D structure
- PDB id
- 7ZTA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- A(OMU)UCUG(2MA)(PSU)(PSU)
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU, 2MA, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZTA_118 not in the Motif Atlas
- Homologous match to HL_1U0B_002
- Geometric discrepancy: 0.3828
- The information below is about HL_1U0B_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 43
Unit IDs
7ZTA|1|ETR1|A|30
7ZTA|1|ETR1|OMU|31
7ZTA|1|ETR1|U|32
7ZTA|1|ETR1|C|33
7ZTA|1|ETR1|U|34
7ZTA|1|ETR1|G|35
7ZTA|1|ETR1|2MA|36
7ZTA|1|ETR1|PSU|37
7ZTA|1|ETR1|PSU|38
Current chains
- Chain ETR1
- tRNA-Gln
Nearby chains
- Chain 16S1
- Small subunit ribosomal RNA; SSU rRNA
- Chain MRN1
- mRNA
- Chain PTR1
- Transfer RNA; tRNA
- Chain S071
- 30S ribosomal protein S7
- Chain S111
- 30S ribosomal protein S11
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