HL_7ZUW_081

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

CACCUUUG

Length

8 nucleotides

Bulged bases

7ZUW|1|5|C|1763, 7ZUW|1|5|U|1765

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUW_081 not in the Motif Atlas

Geometric match to HL_1P6V_001

Geometric discrepancy: 0.3295

The information below is about HL_1P6V_001

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

7ZUW|1|5|C|1760
7ZUW|1|5|A|1761
7ZUW|1|5|C|1762
7ZUW|1|5|C|1763
7ZUW|1|5|U|1764
7ZUW|1|5|U|1765
7ZUW|1|5|U|1766
7ZUW|1|5|G|1767

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BQ

60S ribosomal protein L19-A

Chain BT

60S ribosomal protein L22-A