HL_7ZUW_110

3D structure

PDB id

7ZUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

CUGAACGCCUCUAAG

Length

15 nucleotides

Bulged bases

7ZUW|1|5|G|3117, 7ZUW|1|5|C|3121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUW_110 not in the Motif Atlas

Homologous match to HL_8C3A_068

Geometric discrepancy: 0.0727

The information below is about HL_8C3A_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56677.9

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

7ZUW|1|5|C|3111
7ZUW|1|5|U|3112
7ZUW|1|5|G|3113
7ZUW|1|5|A|3114
7ZUW|1|5|A|3115
7ZUW|1|5|C|3116
7ZUW|1|5|G|3117
7ZUW|1|5|C|3118
7ZUW|1|5|C|3119
7ZUW|1|5|U|3120
7ZUW|1|5|C|3121
7ZUW|1|5|U|3122
7ZUW|1|5|A|3123
7ZUW|1|5|A|3124
7ZUW|1|5|G|3125

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain BH

RPL9A isoform 1

Chain BN

60S ribosomal protein L16-A

Chain Bl

60S ribosomal protein L40-A