3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
CCUGAGAAACGG
Length
12 nucleotides
Bulged bases
7ZUX|1|2|C|402, 7ZUX|1|2|G|403
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7ZUX_010 not in the Motif Atlas
Homologous match to HL_4V88_195
Geometric discrepancy: 0.0953
The information below is about HL_4V88_195
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_06226.1
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
5

Unit IDs

7ZUX|1|2|C|393
7ZUX|1|2|C|394
7ZUX|1|2|U|395
7ZUX|1|2|G|396
7ZUX|1|2|A|397
7ZUX|1|2|G|398
7ZUX|1|2|A|399
7ZUX|1|2|A|400
7ZUX|1|2|A|401
7ZUX|1|2|C|402
7ZUX|1|2|G|403
7ZUX|1|2|G|404

Current chains

Chain 2
18S ribosomal RNA

Nearby chains

Chain DE
40S ribosomal protein S4-A
Chain DG
40S ribosomal protein S6-A
Chain DI
40S ribosomal protein S8-B
Chain DY
40S ribosomal protein S24-A

Coloring options:


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