HL_7ZUX_054

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UGCCUCGGUA

Length

10 nucleotides

Bulged bases

7ZUX|1|5|U|546, 7ZUX|1|5|C|547

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUX_054 not in the Motif Atlas

Geometric match to HL_8C3A_006

Geometric discrepancy: 0.1207

The information below is about HL_8C3A_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7ZUX|1|5|U|542
7ZUX|1|5|G|543
7ZUX|1|5|C|544
7ZUX|1|5|C|545
7ZUX|1|5|U|546
7ZUX|1|5|C|547
7ZUX|1|5|G|548
7ZUX|1|5|G|549
7ZUX|1|5|U|550
7ZUX|1|5|A|551

Current chains

Chain 5

25S ribosomal RNA

Nearby chains