HL_7ZUX_066

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CUUAAUUG

Length

8 nucleotides

Bulged bases

7ZUX|1|5|U|1082

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUX_066 not in the Motif Atlas

Homologous match to HL_8C3A_024

Geometric discrepancy: 0.1178

The information below is about HL_8C3A_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

7ZUX|1|5|C|1077
7ZUX|1|5|U|1078
7ZUX|1|5|U|1079
7ZUX|1|5|A|1080
7ZUX|1|5|A|1081
7ZUX|1|5|U|1082
7ZUX|1|5|U|1083
7ZUX|1|5|G|1084

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain ED

60S ribosomal protein L5

Chain ES

60S ribosomal protein L21-A

Chain Ea

60S ribosomal protein L29