HL_7ZUX_104

3D structure

PDB id

7ZUX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Collided ribosome in a disome unit from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CGUUCAUAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ZUX_104 not in the Motif Atlas

Homologous match to HL_5TBW_061

Geometric discrepancy: 0.0967

The information below is about HL_5TBW_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_82661.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7ZUX|1|5|C|2841
7ZUX|1|5|G|2842
7ZUX|1|5|U|2843
7ZUX|1|5|U|2844
7ZUX|1|5|C|2845
7ZUX|1|5|A|2846
7ZUX|1|5|U|2847
7ZUX|1|5|A|2848
7ZUX|1|5|G|2849

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain EI

60S ribosomal protein L10

Chain El

60S ribosomal protein L40-A