3D structure

PDB id
7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Collided ribosome in a disome unit from S. cerevisiae
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
AGCAGAAU
Length
8 nucleotides
Bulged bases
7ZUX|1|5|G|2899
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7ZUX_105 not in the Motif Atlas
Homologous match to HL_5TBW_062
Geometric discrepancy: 0.0884
The information below is about HL_5TBW_062
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_79150.1
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
12

Unit IDs

7ZUX|1|5|A|2898
7ZUX|1|5|G|2899
7ZUX|1|5|C|2900
7ZUX|1|5|A|2901
7ZUX|1|5|G|2902
7ZUX|1|5|A|2903
7ZUX|1|5|A|2904
7ZUX|1|5|U|2905

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain EH
60S ribosomal protein L9-A
Chain El
60S ribosomal protein L40-A

Coloring options:


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